PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_23.81
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family CPP
Protein Properties Length: 186aa    MW: 19519.2 Da    PI: 8.8658
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_23.81genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR50.44.5e-16443140
                          TCR  1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40
                                 k++kgC+Ckks C kkYCeCf+a+  Cse+CkC dCkN e
  evm.model.supercontig_23.81  4 KHNKGCHCKKSGCFKKYCECFQANILCSENCKCLDCKNFE 43
                                 589***********************************65 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5163419.958144IPR005172CRC domain
SMARTSM011141.6E-18445IPR033467Tesmin/TSO1-like CXC domain
PfamPF036381.3E-12742IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    Send to blast
MLGKHNKGCH CKKSGCFKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGDHANNM  60
AYIQQAANAA ITGAIGSSGY ASPPVSKRRK GQELLFGPAA KDPSISRIGH FQQANNIRAA  120
APSSSLSSVS VARAGGNAAS GSSKFTYRSL LADIIQPQDL KELCSVLVVV AGEAAKSLAG  180
SITLF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006451190.11e-107hypothetical protein CICLE_v10007795mg
RefseqXP_006475649.11e-107PREDICTED: protein tesmin/TSO1-like CXC 5
SwissprotQ9SZD13e-92TCX5_ARATH; Protein tesmin/TSO1-like CXC 5
TrEMBLA0A067DUG91e-107A0A067DUG9_CITSI; Uncharacterized protein
TrEMBLV4UJK81e-107V4UJK8_9R
STRINGPOPTR_0006s16340.11e-99(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM17832884
Representative plantOGRP14691745
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29000.15e-81Tesmin/TSO1-like CXC domain-containing protein